Phytopathology published a focus issue on epidemiology, that includes the following five papers that we have worked on:
Buddenhagen*, C. E., J. F. Hernandez Nopsa*, K. F. Andersen, J. Andrade-Piedra, G. A. Forbes, P. Kromann, S. Thomas-Sharma, P. Useche, and K. A. Garrett. 2017. Epidemic network analysis for mitigation of invasive pathogens in seed systems: Potato in Ecuador. Phytopathology 107:1209-1218. [open access link]
Choudhury, R. A., K. A. Garrett, S. J. Klosterman, K. V. Subbarao, and N. McRoberts. 2017. A framework for optimizing phytosanitary thresholds in seed systems. Phytopathology 107:1219-1228. [link]
Garrett, K. A., K. F. Andersen, F. Asche, R. L. Bowden, G. A. Forbes, P. A. Kulakow, and B. Zhou. 2017. Resistance genes in global crop breeding networks. Phytopathology 107:1268-1278. [open access link] [interactive interface for exploring model behavior]
Hilker, F. M., L. J. S. Allen, V. A. Bokil, C. J. Briggs, Z. Feng, K. A. Garrett, L. J. Gross, F. M. Hamelin, M. J. Jeger, C. A. Manore, A. G. Power, M. G. Redinbaugh, M. A. Rúa and N. J. Cunniffe. 2017. Modelling virus coinfection to inform management of maize lethal necrosis in Kenya. Phytopathology 107:1095-1108. [open access link] [in the news]
Thomas-Sharma, S., J. Andrade-Piedra, M. Carvajal Yepes, J. Hernandez Nopsa, M. Jeger, R. Jones, P. Kromann, J. Legg, J. Yuen, G. A. Forbes, and K. A. Garrett. 2017. A risk assessment framework for seed degeneration: Informing an integrated seed health strategy for vegetatively-propagated crops. Phytopathology 107:1123-1135. [open access link] [Interactive interface for exploring model behavior]